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Rescooped by Complexity Digest from Statistical Physics of Ecological Systems
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The Widened Pipe Model of plant hydraulic evolution

The Widened Pipe Model of plant hydraulic evolution | Papers | Scoop.it

For most of its path through plant bodies, water moves in conduits in the wood. Plant water conduction is crucial for Earth’s biogeochemical cycles, making it important to understand how natural selection shapes conduit diameters along the entire lengths of plant stems. Can mathematical modeling and global sampling explain how wood conduits ought to widen from the tip of a plant to its trunk base? This question is evolutionarily important because xylem conduits should widen in a way that keeps water supply constant to the leaves as a plant grows taller. Moreover, selection should act on economy of construction costs of the conducting system. This issue is ecologically important because it helps suggest why climate change alters vegetation height worldwide.

Read the full article at: www.pnas.org


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Suggested by Artem Kaznatcheev
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Evolution is exponentially more powerful with frequency-dependent selection

Valiant (2009) proposed to treat Darwinian evolution as a special kind of computational learning from statistical queries. The statistical queries represent a genotype’s fitness over a distribution of challenges. And this distribution of challenges along with the best response to them specify a given abiotic environment or static fitness landscape. Valiant’s model distinguished families of environments that are “adaptable-to” from those that are not. But this model of evolution omits the vital ecological interactions between different evolving agents – it neglects the rich biotic environment that is central to the struggle for existence.

 

In this article, I extend algorithmic Darwinism to include the ecological dynamics of frequency-dependent selection as a population-dependent bias to the distribution of challenges that specify an environment. This extended algorithmic Darwinism replaces simple invasion of wild-type by a mutant-type of higher scalar fitness with an evolutionary game between wild-type and mutant-type based on their frequency-dependent fitness function. To analyze this model, I develop a game landscape view of evolution, as a generalization of the classic fitness landscape approach that is popular in biology.

 

I show that this model of eco-evo dynamics on game landscapes can provide an exponential speed-up over the purely evolutionary dynamics of the strict algorithmic Darwinism proposed by Valiant. In particular, I prove that the noisy-Parity environment – which is known to be not adaptable-to under strict algorithmic Darwinism (and conjectured to be not PAC-learnable) – is adaptable-to by eco-evo dynamics. Thus, the ecology of frequency-dependent selection does not just increase the tempo of evolution, but fundamentally transforms its mode.

 

The eco-evo dynamic for adapting to the noisy-Parity environment proceeds by two stages: (1) a quick stage of point-mutations that moves the population to one of exponentially many local fitness peaks; followed by (2) a slower stage where each ‘step’ follows a double-mutation by a point-mutation. This second stage allows the population to hop between local fitness peaks to reach the unique global fitness peak in polynomial time. The evolutionary game dynamics of finite populations are essential for finding a short adaptive path to the global fitness peak during the second stage of the adaptation process. This highlights the rich interface between computational learning theory, evolutionary games, and long-term evolution.

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Merging evolutionary history into species interaction networks

The occurrence of complex networks of interactions among species not only relies on species co-occurrence, but also on inherited traits and evolutionary events imprinted in species phylogenies. The phylogenetic signal found in ecological networks suggests that evolution plays an important role in determining community assembly and hence could inform about the underpinning mechanisms.
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Adaptive Prolonged Postreproductive Life Span in Killer Whales

Prolonged life after reproduction is difficult to explain evolutionarily unless it arises as a physiological side effect of increased longevity or it benefits related individuals (i.e., increases inclusive fitness). There is little evidence that postreproductive life spans are adaptive in nonhuman animals. By using multigenerational records for two killer whale (Orcinus orca) populations in which females can live for decades after their final parturition, we show that postreproductive mothers increase the survival of offspring, particularly their older male offspring. This finding may explain why female killer whales have evolved the longest postreproductive life span of all nonhuman animals.

 

Adaptive Prolonged Postreproductive Life Span in Killer Whales
Emma A. Foster, et al.

Science 14 September 2012:
Vol. 337 no. 6100 p. 1313
http://dx.doi.org/10.1126/science.1224198

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Growth dynamics and the evolution of cooperation in microbial populations

Microbes providing public goods are widespread in nature despite running the risk of being exploited by free-riders. However, the precise ecological factors supporting cooperation are still puzzling. Following recent experiments, we consider the role of population growth and the repetitive fragmentation of populations into new colonies mimicking simple microbial life-cycles. Individual-based modeling reveals that demographic fluctuations, which lead to a large variance in the composition of colonies, promote cooperation. Biased by population dynamics these fluctuations result in two qualitatively distinct regimes of robust cooperation under repetitive fragmentation into groups. First, if the level of cooperation exceeds a threshold, cooperators will take over the whole population. Second, cooperators can also emerge from a single mutant leading to a robust coexistence between cooperators and free-riders. We find frequency and size of population bottlenecks, and growth dynamics to be the major ecological factors determining the regimes and thereby the evolutionary pathway towards cooperation.

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Emergent Criticality through Adaptive Information Processing in Boolean Networks

Emergent Criticality through Adaptive Information Processing in Boolean Networks | Papers | Scoop.it

We study information processing in populations of Boolean networks with evolving connectivity and systematically explore the interplay between the learning capability, robustness, the network topology, and the task complexity. We solve a long-standing open question and find computationally that, for large system sizes N, adaptive information processing drives the networks to a critical connectivity Kc=2. For finite size networks, the connectivity approaches the critical value with a power law of the system size N. We show that network learning and generalization are optimized near criticality, given that the task complexity and the amount of information provided surpass threshold values. Both random and evolved networks exhibit maximal topological diversity near Kc. We hypothesize that this diversity supports efficient exploration and robustness of solutions. Also reflected in our observation is that the variance of the fitness values is maximal in critical network populations. Finally, we discuss implications of our results for determining the optimal topology of adaptive dynamical networks that solve computational tasks.

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Is the cultural evolution of technology cumulative or combinatorial?

Explanations of human technology often point to both its cumulative and combinatorial character. Using a novel computational framework, where individual agents attempt to solve problems by modifying, combining and transmitting technologies in an open-ended search space, this paper re-evaluates two prominent explanations for the cultural evolution of technology: that humans are equipped with (i) social learning mechanisms for minimizing information loss during transmission, and (ii) creative mechanisms for generating novel technologies via combinatorial innovation. Here, both information loss and combinatorial innovation are introduced as parameters in the model, and then manipulated to approximate situations where technological evolution is either more cumulative or combinatorial. Compared to existing models, which tend to marginalize the role of purposeful problem-solving, this approach allows for indefinite growth in complexity while directly simulating constraints from history and computation. The findings show that minimizing information loss is only required when the dynamics are strongly cumulative and characterised by incremental innovation. Contrary to previous findings, when agents are equipped with a capacity for combinatorial innovation, low levels of information loss are neither necessary nor sufficient for populations to solve increasingly complex problems. Instead, higher levels of information loss are advantageous for unmasking the potential for combinatorial innovation. This points to a parsimonious explanation for the cultural evolution of technology without invoking separate mechanisms of stability and creativity.

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Coenzyme world model of the origin of life

Coenzyme world model of the origin of life | Papers | Scoop.it
The origin of life means the emergence of heritable and evolvable self-reproduction. However the mechanisms of primordial heredity were different from those in contemporary cells. Here I argue that primordial life had no nucleic acids; instead heritable signs were represented by isolated catalytically active self-reproducing molecules, similar to extant coenzymes, which presumably colonized surfaces of oil droplets in water.
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Predation risk drives social complexity in cooperative breeders

It is widely accepted that high predation risk may select for group living, but predation is not regarded as a primary driver of social complexity. This view neglects the important effect of predation on dispersal and offspring survival, which may require cooperation among group members. The significance of predation for the evolution of social complexity can be well illustrated by behavioral and morphological adaptations of highly social animals showing division of labor, such as eusocial insects and cooperatively breeding fishes. By examining the diversity of social organization in a cooperative cichlid in relation to ecological variation, we show that predation risk has the greatest explanatory power of social complexity. This stresses the significance of predation for social evolution.
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Why Millennials Don't Want To Buy Stuff

Why Millennials Don't Want To Buy Stuff | Papers | Scoop.it

Compared to previous generations, Millennials seem to have some very different habits that have taken both established companies and small businesses by surprise. One of these is that Generation Y doesn't seem to enjoy purchasing things.


The Atlantic's article "Why Don't Young Americans Buy Cars?" mused recently about Millennials' tendency to not care about owning a vehicle. The subtitle: "Is this a generational shift, or just a lousy economy at work?"


What if it's not an "age thing" at all? What's really causing this strange new behavior (or rather, lack of behavior)? Generational segments have profound impacts on perception and behavior, but an "ownership shift" isn't isolated within the Millennial camp. A writer for USA Today shows that all ages are in on this trend, but instead of an age group, he blames the change on the cloud, the heavenly home our entertainment goes to when current media models die. As all forms of media make their journey into a digital, de-corporeal space, research shows that people are beginning to actually prefer this disconnected reality to owning a physical product.


Via ddrrnt
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Strong gender differences in reproductive success variance, and the times to the most recent common ancestors

The Time To the Most Recent Common Ancestor (TMRCA) based on human
mitochondrial DNA (mtDNA) is estimated to be twice that based on the
non-recombining part of the Y chromosome (NRY). These TMRCAs have special
demographic implications because mtDNA is transmitted only from mother to
child, and NRY from father to son. Therefore, mtDNA reflects female history,
and NRY, male history. To investigate what caused the two-to-one female-male
TMRCA ratio in humans, we develop a forward-looking agent-based model (ABM)
with overlapping generations and individual life cycles.

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